2008 US User Group Meeting Archive
August 7th and 8th, Boston, MA

Thursday Aug 7th: 8.30 am - 5pm

Title Presenter Institution
Company Introduction Alex Drijver ChemAxon
Product Overview Larry Norder ChemAxon
ChemAxon and an Electronic Research Habitat at the Biopolis Experimental Research Centre Peter Condron ETC, A*STAR
Chemical Database Management with JChem Base and Cartridge Szabolcs Csepregi ChemAxon
Successful Implementation of the ChemAxon Chemistry Cartridge in a Custom Built Screening Management Application: A case Study. Yao Liu*, Zhengdeng Lei and Hakim Djaballah Memorial Sloan-Kettering Cancer Center
Standardizer: canonicalization, conversion and registration. Gyorgy Pirok ChemAxon
Palatin Technologies’ Cheminformatics Solution. Jim Bullington Palatin Technologies
Large-Scale Annotation of Small-Molecule Libraries Using Public Databases. Kaisheng Chen Genomics Institute of the Novartis Research Foundation
PubChem data extraction and integration using Instant JChem Oleg Ursu*, Cristian Bologa and Tudor I. Oprea Div. of Biocomputing, U. New Mexico
Developing a Compound Registration System utilizing ChemAxon's Oracle Cartridge and incorporating Web 2.0 concepts into research informatics Matthew Pustelnik Takeda, San Diego
Combinatorial Markush at ChemAxon: from drawing to analysis Szabolcs Csepregi ChemAxon
Very large databases and 2D- and 3D-Similarity Searching Lutz Weber OntoChem
Reactor and Metabolizer: in vitro, in vivo and in situ in silico Gyorgy Pirok ChemAxon
The Pistoia Alliance: An Emerging Cross-pharma Collaboration Ashley George, Debra Igo, Kevin Hebbel*, Nick Lynch, Thomas Mueller & Matthias Nolte* GSK, Novartis, Pfizer, AstraZeneca, Novartis, chemITment

Friday Aug 8th: 8.30 am - 2.00 pm (closes)

Title Presenter Institution
Sketching, viewing and predicting properties with Marvin: features, tips and tricks Gyorgy Pirok ChemAxon
Toward the Development of an Open Source Cheminformatics Platform for HTS Data Analysis and Visualization Trung Nguyen*, Ajit Jadhav, Noel Southall, Ruili Huang NIH Chemical Genomics Center (NCGC)
Pipelining ChemAxon Szilard Dorant ChemAxon
Partner lightning round presentations Agilent, Collaborative Drug Discovery, DeltaSoft, Kinematik, SureChem, Synaptic Science, Tripos
Clustering made human Miklos Vargyas ChemAxon
Clustering for the Masses: Pairing JKlustor with Seurat Derek A. Debe* & Ravindra Mamidipaka Abbott Laboratories
Instant JChem - latest developments and future plans Tim Dudgeon ChemAxon
Instant J Chem: one-stop information hub for medicinal chemists Carlos H. Faerman* and W. Patrick Walters Vertex Pharmaceuticals
New product launch: JChem for Excel Ferenc Csizmadia ChemAxon

Posters exhibited

Title Author(s) Institution(s)
Improving Pathway Prediction Junfeng Gao, MSE, MS; Larry P. Wackett, PhD; and Lynda B.M. Ellis, PhD University of Minnesota
Integrated Web-based Tools for StructureSearch Qiner Yang, Chris Petersen, Robert Beltran, Steven Wilkens, Andy Martin, Dan Severance, Brian Bolt, John McNeil Kalypsys
Working with IUPAC names using ChemAxon tools Daniel Bonniot et al. ChemAxon
Representation, searching and enumeration of Markush structures-from molecules towards patents Szabolcs Csepregi et al. ChemAxon
Maximum Common Substructure Based Hierarchical Clustering Miklós Vargyas et al. ChemAxon
Chemical Terms - Functions for Cheminformatics György Pirok et al. ChemAxon