.NET Examples

Table of Contents

• 1. Setting up a project using Marvin
• 2. Setting up a project using JChem
• 3. API documentation
• 4. Marvin Examples
• 5. JChem Examples

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1. Setting up a project using Marvin

1. Download and install (extract) the .NET package
2. Add the following dll files as references to your project:
   

   IKVM.AWT.WinForms.dll
   IKVM.OpenJDK.Beans.dll
   IKVM.OpenJDK.Charsets.dll
   IKVM.OpenJDK.Corba.dll
   IKVM.OpenJDK.Core.dll
   IKVM.OpenJDK.Jdbc.dll
   IKVM.OpenJDK.Management.dll
   IKVM.OpenJDK.Media.dll
   IKVM.OpenJDK.Misc.dll
   IKVM.OpenJDK.Naming.dll
   IKVM.OpenJDK.Remoting.dll
   IKVM.OpenJDK.Security.dll
   IKVM.OpenJDK.SwingAWT.dll
   IKVM.OpenJDK.Text.dll
   IKVM.OpenJDK.Util.dll
   IKVM.OpenJDK.XML.API.dll
   IKVM.OpenJDK.XML.Bind.dll
   IKVM.OpenJDK.XML.Crypto.dll
   IKVM.OpenJDK.XML.Parse.dll
   IKVM.OpenJDK.XML.RelaxNG.dll
   IKVM.OpenJDK.XML.Transform.dll
   IKVM.OpenJDK.XML.WebServices.dll
   IKVM.OpenJDK.XML.XPath.dll
   IKVM.Reflection.Emit.dll
   IKVM.Reflection.Emit.PdbWriter.dll
   IKVM.Runtime.dll
   IKVM.Runtime.JNI.dll
   JChem.dll
   JChemExt.dll
   MarvinHelp.dll

3. Recommended initialization step for Marvin:

   ChemAxon.JChem.Common.Init();

2. Setting up a project using JChem

1. Download and install the .NET package
2. Add the following dll files as references to your project:

   IKVM.AWT.WinForms.dll
   IKVM.OpenJDK.Beans.dll
   IKVM.OpenJDK.Charsets.dll
   IKVM.OpenJDK.Corba.dll
   IKVM.OpenJDK.Core.dll
   IKVM.OpenJDK.Jdbc.dll
   IKVM.OpenJDK.Management.dll
   IKVM.OpenJDK.Media.dll
   IKVM.OpenJDK.Misc.dll
   IKVM.OpenJDK.Naming.dll
   IKVM.OpenJDK.Remoting.dll
   IKVM.OpenJDK.Security.dll
   IKVM.OpenJDK.SwingAWT.dll
   IKVM.OpenJDK.Text.dll
   IKVM.OpenJDK.Util.dll
   IKVM.OpenJDK.XML.API.dll
   IKVM.OpenJDK.XML.Bind.dll
   IKVM.OpenJDK.XML.Crypto.dll
   IKVM.OpenJDK.XML.Parse.dll
   IKVM.OpenJDK.XML.RelaxNG.dll
   IKVM.OpenJDK.XML.Transform.dll
   IKVM.OpenJDK.XML.WebServices.dll
   IKVM.OpenJDK.XML.XPath.dll
   IKVM.Reflection.Emit.dll
   IKVM.Reflection.Emit.PdbWriter.dll
   IKVM.Runtime.dll
   IKVM.Runtime.JNI.dll
   JChem.dll

   The following third party dll files may also be required (depending on usage):

   Database drivers
   jtds-1.2.2.dll - Library used to interact with MSSql 2005 database.
   mysql-connector-java-bin.dll - Library used to interact with MySQL database.
   ojdbc14.dll - Library used to interact with Oracle database.
   postgresql-8.3-604.jdbc4.dll - Library used to interact with Postgresql database.
   

3. API documentation

The API documentation is available in CHM and online.

4. Marvin Examples

Full examples with Visual Studio 2005 solutions are provided by the installer package.

1. Integrating MarvinSketch into a .NET Winforms application

(coming soon)

2. SimpleImport

A simple example showing how to import structures.

View ImportForm.cs

3. MoleculeImage

In this example you will find 2 methods to obtain the image for a structure. The toBinFormat method supports formats like JPEG, PPM, PNG and the second method is using a MolPrinter object to create an EMF image. This method is faster than using toBinFormat.

View MoleculeImage.cs

5. JChem Examples

Full examples with Visual Studio 2005 solutions are provided by the installer package.

1. JChemBaseSearch

A simple example of JChem Base Search.

View BaseSearchForm.cs   View DataAccess.cs   View NetMolImporter.cs

2. InsertDeleteUpdateMolecules

An example with simple insert, delete, update operations for molecules within a database.
You will also find in this example how to use database drivers for Oracle, MSSql2005, MySQL, Postgresql, ODBC connections.

View MainForm.cs