Standardizing Structure Files

Structure files can be standardized using a standardizer file. This process applies the rules specified in the standardizer file and creates a new output file.

To standardize a structure file:

Add a standardizer file to your project (Choose File -> New File... from the main menu) to create one from one of the templates if necessary).
Edit the standardizer to contain the rules you require. For more thorough documentation, view ChemAxon's: Standardizer User's Guide
Right-click the node of the standardizer file and choose Standardize....
Select the input file, output format and output location.
Click OK. The input file is processed with the standardizer to generate the output file.

Note: Properties in the input file are copied to the output file, as long as a file format that supports properties is selected.