chemaxon.metabolizer
Class MetabolizerTemporaryFileStorage

java.lang.Object
  chemaxon.metabolizer.MetabolizerTemporaryFileStorage

All Implemented Interfaces:

MetabolizerTemporaryStorage

public class MetabolizerTemporaryFileStorage
extends java.lang.Object
implements MetabolizerTemporaryStorage

File based implementation of MetabolizerTemporaryStorage interface

Author:

Attila Szabo

Constructor Summary

MetabolizerTemporaryFileStorage()

MetabolizerTemporaryFileStorage(java.io.File substrates)

MetabolizerTemporaryFileStorage(java.lang.String path)

Method Summary

void	close() Closes storage.
MetabolizerExporter	getExporter() Returns MetabolizerExporter instance for metabolites
MetabolizerImporter	getImporter() Returns MetabolizerImporter instance for substrates
void	newIteration() Creates a new metabolizm iteration.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MetabolizerTemporaryFileStorage

public MetabolizerTemporaryFileStorage(java.io.File substrates)
                                throws MetabolizerIOException

Throws:

MetabolizerIOException

MetabolizerTemporaryFileStorage

public MetabolizerTemporaryFileStorage(java.lang.String path)
                                throws MetabolizerIOException

Throws:

MetabolizerIOException

MetabolizerTemporaryFileStorage

public MetabolizerTemporaryFileStorage()
                                throws MetabolizerIOException

Throws:

MetabolizerIOException

Method Detail

getExporter

public MetabolizerExporter getExporter()
                                throws MetabolizerIOException

Description copied from interface: MetabolizerTemporaryStorage

Returns MetabolizerExporter instance for metabolites

Specified by:

getExporter in interface MetabolizerTemporaryStorage

Returns:

MetabolizerExporter

Throws:

MetabolizerIOException

getImporter

public MetabolizerImporter getImporter()
                                throws MetabolizerIOException

Description copied from interface: MetabolizerTemporaryStorage

Returns MetabolizerImporter instance for substrates

Specified by:

getImporter in interface MetabolizerTemporaryStorage

Returns:

MetabolizerImporter

Throws:

MetabolizerIOException

newIteration

public void newIteration()
                  throws MetabolizerIOException

Description copied from interface: MetabolizerTemporaryStorage

Creates a new metabolizm iteration. Substrates will be the last metabolites.

Specified by:

newIteration in interface MetabolizerTemporaryStorage

Throws:

MetabolizerIOException

close

public void close()
           throws MetabolizerIOException

Description copied from interface: MetabolizerTemporaryStorage

Closes storage. Releases resources

Specified by:

close in interface MetabolizerTemporaryStorage

Throws:

MetabolizerIOException