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Future-proofing Cheminformatics Platforms Publication
Changing organizations, shrinking budgets and concerns about costly and inflexible legacy software are prompting organizations to review their cheminformatics requirements for new product…
April 2012
JChem enters Formula 1 (and formula search enters JChem) Presentation
This talk will detail the latest and future developments in the JChem server products: JChem Base, Cartridge, Web Services and Markush search. The new molecular formula search types will…
May 2011
JChem Cartridge: Cheminformatics Platform for Oracle Poster
JChem Cartridge adds chemical knowledge to the Oracle platform. Data can be searched by structure, substructure and similarity criteria through extending Oracle’s native SQL languag…
June 2007
Advanced structural searching using ChemAxon tools Poster
May 2005
Making developing chemistry based systems easier - new (and old) languages and frameworks on the Java virtual machine. Presentation
The latest standards for enterprise systems based on the Java platform can provide new approaches bringing type-safety, better support for refactoring, more reuse, extensibility and testa…
May 2010
Real World Chemistry - virtual chemistry in the real world Presentation
Laboratory based drug discovery efforts, on their own, are insufficient to deal with the wealth of potentially druggable targets. Virtual discovery has an increasing role to play in the d…
May 2005
Advanced Structural Search Using ChemAxon Tools Presentation
Molecular search techniques are invaluable tools in all cheminformatics systems including rational drug design, compound registration systems and laboratory information management systems…
March 2005
Chemical Database Management with JChem Base and Cartridge Presentation
JChem Base is a chemical database management toolkit to handle chemical structures and associated data (user-defined or predicted), stored in relational databases. JChem Cartridge provide…
August 2008
Compound storage and retrieval with JChem Cartridge for Oracle Presentation
Key topics:
JChem Cartridge as a JChem Base extension to SQL
functional perspective
architectural perspective
Getting the most out of the cartridge
May 2005
JChem Base and Cartridge latest Presentation
Developments since the last UGM will be presented, with an open discussion of future plans. Main developments of the past year include table types, calculated columns, API improvements, r…
June 2007
Migration from ISIS environments Presentation
The presentation focuses on the differences, similarities, pros and contras of migration from an ISIS environment to a related ChemAxon product. It gives a proper overview about the featu…
November 2008
Chemical Database Management with JChem Base and Cartridge Presentation
JChem Base is a chemical database management toolkit to handle chemical structures and associated data (user-defined or predicted), stored in relational databases. JChem Cartridge provide…
May 2008
The year of chemistry with JChem - formula search, unique structures, Markush, speed ups and more Presentation
This talk will detail the latest and future developments in the JChem server products: JChem Base, Cartridge, Web Services and Markush search. The new molecular formula search types will …
September 2011
Twenty ten, a year of JChem Presentation
The back-end (chemical engine) products of ChemAxon will be introduced with special focus on latest developments. JChem Base is a chemical database management toolkit to handle molecules,…
September 2010
What's new in JChem back-end Presentation
JChem Base is a chemical database management toolkit to handle molecules, chemical reactions and Markush structures and associated data stored in relational databases. JChem Cartridge pro…
September 2009
Interfacing the JChem Suite outside of Java (Web Services, .NET, SQL, Workflow platforms) Presentation
Understand and decide your best interface from the many non-Java programming interfaces to the JChem Suite of tools. Many interfaces will be discussed, such as the pure .Net interface, …
May 2010
JChem Cartridge: Cheminformatics Platform for Oracle Poster
JChem Cartridge adds chemical knowledge to the Oracle platform. Data can be searched by structure, substructure and similarity criteria through extending Oracle’s native SQL languag…
March 2006
Advanced Structural Search Using ChemAxon Tools Presentation
The molecular search techniques represent an extremely wide range of solutions in all cheminformatics systems. This presentation starts with highlighting some crucial examples of applicat…
November 2004
JChem Cartridge Presentation
January 2010
Power search Presentation
Power search: How to tune search for efficiency and performance
Search parameters to fine-tune matching
- Search types
- Parameters to allow stricter or more loose matching
Selected Exa…
June 2006
Fine tuning JChem Cartridge Presentation
Granting user privileges
- one example with JChem tables, one with regular structure tables
Performance
- Rearranging queries to use filter queries and/or composite queries
- using multi…
June 2006
Product group:
IT platform toolkit
Oracle Cartridge latest Presentation
Management:
- simplified upgrade procedure
- support for granting privileges to users in a semi-automated configuragable way
Performance:
- multiple query structures can be specified to …
June 2006
Product group:
IT platform toolkit
What's new in JChem back-end and Markush storage, search and enumeration. Presentation
JChem Base is a chemical database management toolkit to handle molecules, chemical reactions and Markush structures and associated data (user-defined or predicted), stored in relational d…
June 2009
GSK’s Helium Rises to the Top In Press
Familiarity breeds contempt, it’s said, but not in the case of GlaxoSmithKline’s most recent tool for SAR analysis: Helium, which has the ubiquitous Microsoft Excel at its core, and r…
August 2011
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