CHEMAXON RELEASES JCHEM 2.0 AND NEW TOOLS FOR PHARMACOPHORE SCREENING, STRUCTURE STANDARDIZATION, RECAP FRAGMENTATION, REACTION MODELING AND METABOLITE PREDICTION.
May 7th, 2003, Budapest, Hungary: ChemAxon, a software solutions provider for biotechnology, today announced the release of JChem 2.0, the latest version of the Java database engine enabling chemical communication across networks. The release also sees the addition of five powerful tool sets for pharmacophore screening, structure standardization, RECAP fragmentation, reaction modeling and metabolite prediction.
As the first commercially available Java chemical database manager, JChem opened the door to powerful web based chemical storage and network communication. By supporting chemical structure storage and retrieval, substructure and similarity searching in various relational databases, such as Oracle and MySQL, JChem deployment has been extensive and rapid.
This 2.0 release improves JChemBase performance and introduces support of reaction databases and expands the JChem family application areas with new tool classes, including:
- Screen is a comprehensive HTS suite that works with files and
structure databases and features various models for the similarity
analysis of molecules and pharmacophore hypotheses. The
pharmacophore mapping tool offers customizable pharmacophore
models as well as an optimizer to find the 'best' screening metrics and
parameter sets.
- Standardizer is a structure canonization tool converting molecules
from different sources into standard representation forms. The tool
can automate the identification of mesomers and tautomers and can
be used for counter-ion removal.
- Reactor is a platform for performing combinatorial chemical reactions
by processing reactants to products according to generic reaction
equations. The tool evaluates Chemical Terms containing complex
chemical expressions built from structural and reactivity conditions.for
lead discovery.
- Fragmenter uses the RECAP method to create building blocks by
fragmenting larger molecules. The tool is particularly relevant for
generating analogues of biologically active compounds for lead
discovery.
- Metabolizer is a metabolism simulation application which combines molecule transformation reactions to produce all possible metabolites of a given compound or compound database. The resulting set can be used during ADME evaluation phases or as a route to identify prodrugs.
This current release includes the latest Marvin software. Marvin is a collection of Java tools for drawing and displaying chemical structures, substructures and reactions and includes plug-ins to predict physicochemical characteristics such as pKa, logP and logD.
About ChemAxon
ChemAxon is a leader in providing Java based chemical software
development platforms for the biotechnology and pharmaceutical
industries. By focusing upon active interaction with users and core
portability, ChemAxon creates powerful, cost effective cross platform
solutions and programming interfaces to power modern
cheminformatics and chemical communication.
For further information please contact: Alex Allardyce, Director of Communications on: +361 453 2660 or moc.noxamehc@aa.
