pKa
Related links
Overview
Most molecules contain some specific functional groups likely to loose or gain a proton under specific circumstances. Each ionization equilibrium between protonated or deprotonated forms of the molecule can be described with a constant value called pKa. The pKa plugin calculates the pKa values of all proton gaining or losing atoms on the basis of the partial charge distribution.
There is no upper limit for the number of ionizable atoms in the molecule and so the pKa Plugin can also be used for proteins.
Learn more about how the plugin calculates pKa.
Related Library items
chemicalize.org Publication
February 2012
The year of chemistry with JChem - formula search, unique structures, Markus… Presentation
This talk will detail the latest and future developments in the JChem server products: JChem Base, Cartridge, Web Services and Markush search. The new molecular formula search types will …
September 2011
Perspiration, Inspiration, and Happenstance in Scientific Discoveries Presentation
This presentation will include the mostly unwritten stories of how and why QSAR, SMILES, CLOGP, DISCO pharmacophore detection, 3D searching, and CONCORD were discovered. Hint: these inve…
May 2011
