Chemical Drawing

MarvinSketch allows users to quickly draw molecules using several built-in functionality.

Property prediction

Implements Calculator plugins that allow users to directly characterize molecules on the canvas.

Switch chemical file types

MolConverter is a command line program that converts between various file types.

Ease of visualization

MarvinView and MarvinSpace allows 2D and 3D small molecule and protein visualization.

What’s in the box?

MarvinSketch

MarvinSketch is an advanced chemical editor for drawing chemical structures, queries and reactions. It has a rich (and growing) list of editing features, is chemically aware and is able to call ChemAxon’s structure based calculation plugins for structures on the canvas. Learn more about MarvinSketch »

MarvinSpace

MarvinSpace is a 3D visualization tool for small molecules, proteins, nucleic acids or crystals. Using MarvinSpace you can also visualize various molecular surfaces, molecular orbitals as well as volumetric data such as electrostatic potential, hydrophobicity. Manual editing in 3D is also suported. Learn more about MarvinSpace »

MarvinView

MarvinView is an advanced chemical viewer for single and multiple chemical structures, queries, reactions and non chemical data included in the file. MarvinView allows easy scrolling of thousands of molecules either in a grid view or in a spreadsheet view. In addition to the support of reporting and publishing MarvinView also enables users to perform structure calculations. Learn more about MarvinView »

Chemical feature parade in Marvin

Opens various file formats

Marvin supports a wide range of standard file formats: MOL, MOL2, SDF, RXN, RDF (V2000/V3000), SMILES, SMARTS/SMIRKS (recursive), MRV, InChi, CML, PDB.

Display and Formatting

Display and Formatting

MarvinSketch supports various molecule display and formatting options enabling users to generate high quality structure images for reporting or publication purposes.

Ease of chemical structure drawing

MarvinSketch allows users to quickly draw molecules using its several built-in functionality such as customizable shortcuts, sprout drawing, popup menus, user friendly and customizable interface.

Atom properties

MarvinSketch can assign stereochemistry, charge, valence, radicals and isotopes.

Bond properties

Single, double, triple and aromatic forms are supported, moreover using wedge bonds user can assign stereochemistry to atoms.

Query drawing

Atom lists, bond lists, not lists, generic atoms, R-groups are some of the query building features available in MarvinSketch.

Reaction drawing

MarvinSketch allows single step reaction drawing and mapping.

Structure checker

Structure checker highlights inappropriate chemical structures and offers a solution.

Macromolecule visualization

MarvinSpace displays protein structures in 3D.

What flavors can I get that in?

Marvin can be easily installed on most operating systems (Windows, Linux, Mac OS X) either 32-bit or 64-bit platforms and seamlessly integrates into web pages and third party applications via its Application Programming Interface (API).

Marvin is available in the following distributions:

Java Applets

Implement into Java enabled web pages.

Java Beans

Install on your desktop or implement in your custom application.

Java Web Start

Deploy end user applications via the web.

.NET

Native integration within .NET applications.

Marvin for JavaScript is now avaliable!

Marvin for JavaScript is a novel light-weight chemical editor suitable for generating standard chemical structures and simple queries on modern web browser pages without the need for installing Java. It provides all the essential features for quick and easy structure drawing as well as flexible editing options for molecular manipulations. Learn more about Marvin for JavaScript »

Articles in the library

Pearson Education and ChemAxon: Partnership to develop educational MarvinSketch Presentation

Media & Software Developers from Pearson Education to discuss the integration of ChemAxon’s MarvinSketch, MarvinView and JChem into the online homework, tutorial, and assessment sys…

The Lilly Open Innovation Drug Discovery Program Presentation

Through the Open Innovation Drug Discovery program (OIDD), Lilly has established a network of top global research talent at academic and biotech institutions to provide them access to pro…
September 2012 Author: ()

Query features in ChemAxon’s tools Webinar

Quite often researchers are faced with the problem of searching large libraries of molecules looking for hits with certain features. To reduce the number of sequential queries that are ty…
March 2013 Author: ()

Still have questions?

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