
Migrating chemistry informatics
ChemAxon has your next platform. All the features; web services, compound registration, SharePoint and integrated desktop applications to help roll it out, enterprise functionality and performance, pragmatic pricing and the best support in the business. Find out why Life Science R&D is choosing ChemAxon.
Arrange contact: migrating@chemaxon.comThe right functionality in the right places
On the desktop
- Instant JChemstructure database management, search & prediction
- JChem for Excelenabling chemistry in Excel
- Marvin Suitestructure, query & reaction editor, viewer & visualization
Build with API Toolkit
- JChem Cartridge for Oraclechemical intelligence on Oracle platform
- JChem Base
structure searching & database access - Structure Checkervalidation and correction of structures
- Standardizerchemical business rules processing
Web Services and Add-ons
- JChem Web Services
web services integration interface - Compound Registration Services
- SharePoint Add-onVisit online demo
- Markush Search Add-onstore & search Markush structures
Key business and technical drivers
- Does the target platform provide all the features you need?
- Does the technology support your user base in terms of usability, performance and control?
- Is it ready and customisable to deploy out of the box?
- Does it provide flexibility to adapt to change in the future?
- Used by top-10 pharmaceutical companies, SME biotechs, agro and fine chemicals companies, content publishers, patent offices
- Ongoing commitment to innovation
- Custom development
- High quality and responsive support and services
- ChemAxon technology demonstrates lower cost of ownership compared with established options
- Flexible license options including perpetual licenses, milestone-based payments
- Web and cloud ready: Applet, .NET, SharePoint, Java Web Start
- Desktop and MS Office ready: Instant JChem (local and remote db access), JChem for Excel, OLE, standalone applications
- Same code in all instances = same results and consistent chemical representation throughout
- Choice of interoperable technology components to build entire platforms or provide specific chemistry capabilities
- Partner network of over 30 vendors including ELN, LIMS, data mining analysis and visualisation, workflow, content providers, and more…
- Capabilities and content already available
Presentations
Implementation
of ChemAxon in a SOA environment
GlaxoSmithKline
-
Shane Weaver
A Novel Approach to Pharmaceutical Registration ‐ Registration as a Service
GlaxoSmithKline
-
Charles Wilkins
Migrating to ChemAxon – the good, the bad & the ugly
Evotec
-
Catherine Reisser
Development and Deployment of Reagent Logistics Solution Using JChem Base/Cartridge
Takeda
-
Matthew Pustelnik
Migrating
Chemical Toolkits
Broad
Institute -
Dan Durkin
Integrating
JChem and Marvin with an ELN
Evotec
-
Ian Berry
ChemAxon’s
Marvin & JChem (v 3.1.3) vs. MDL® ISIS/Draw ISIS/Host (v
4.0)
FMC Corp
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David Roush
Enterprise Deployment of JChem for Excel (JC4XL)
Takeda
-
Matthew Pustelnik
SAR analysis in Excel using Helium and JChem
GlaxoSmithKline
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Karen Worsfold
Deploying Instant JChem on an Enterprise Scale
GlaxoSmithKline
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Brett Hiemenz
Restoration of Molecular Artifacts: Structure checker and fixer framework for registration systems
ChemAxon
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György Pirok
JChem for SharePoint
ChemAxon
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Tamás Pelcz
A sneak peek at the ChemAxon Registration Service
ChemAxon
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Jonathan Lee
Instant JChem – more ways to see your data
ChemAxon
-
Tim Dudgeon
Instant JChem
Instant JChem is a desktop application for end user scientists. With Instant JChem you can create, explore and share chemical and non chemical data in local and remote databases without additional administration. Instant JChem has a wide and growing range of functionality including customizable database views, integration of library enumeration and dynamic population of columns with singular and combined molecular property and descriptor predictions. Visit Instant JChem page
JChem Base
JChem Base is a tool for the development of cheminformatics applications allowing storage and search of structural and non-structural data.
JChem Base can handle molecule, reaction, polymer, Markush and query structural contents. JChem Base will integrate with a variety of database systems (Oracle, MS SQL Server, DB2, Access, etc) with web interfaces and offers fast substructure, similarity, exact, superstructure and other searches. Visit JChem Base page
Structure Checker
Structure checker is a tool for filtering drawing mistakes or special structural elements.
Registering a compound in a company’s database might limit the user in for example the introduction of non-natural isotopes, query bonds, species with charge etc. Structure checker runs a check on the molecule(s) features and lists them in a separate window, with the option to refresh when you make changes to your drawing. The Structure checker works with predefined checking elements and you can choose which ones should be considered when you run a check. Visit Structure checker page
Web Services
JChem Web Services provides a web interface that extends access to ChemAxon tools over the Internet or an internal network allowing easier development of applications and scripting using other programming languages such as Javascript, Perl and Python. Visit Web services page
JChem Cartridge
JChem Cartridge adds chemical intelligence to the Oracle platform. Data can be searched by structure, substructure and similarity criteria through extending Oracle’s native SQL language. Chemical data can be easily inserted and modified using SQL. Most industry standard chemical formats (MOL/SDF/RDF – v2.0 and v3.0, SMILES, SMARTS, CML, etc) are natively handled using JChem indices. The Cartridge enables all chemical database management and search features of JChem Base from any SQL-capable platform. Visit JChem Cartridge page
Marvin Suite
MarvinSketch is an advanced chemical editor for drawing chemical structures, queries and reactions. It has a rich (and growing) list of editing features, is chemically aware and is able to call ChemAxon’s structure based calculation plugins for structures on the canvas. Visit MarvinSketch page
MarvinView is an advanced chemical viewer for single and multiple chemical structures, queries and reactions. It has a rich (and growing) list of vizualization features, is chemically aware and is able to call ChemAxon’s structure based calculation plugins for viewed structures. Visit MarvinView page
Standardizer
Standardizer is a structure canonicalization tool in JChem for converting molecules from different sources into standard representational forms. Standardizer can automate the identification of mesomers and tautomers and can be used for counter-ion removal. Visit Standardizer page
JChem for SharePoint
Enterprise capable SharePoint JChem functionality releases your chemistry within SharePoint to: live sketch, manage and search chemical structures, characterize and sort your chemical data, import chemical names, index and search across your corporate severs and connect SharePoint to your chemical databases. Visit online demo.
Compound Registration Service
Our Compound Registration Service enables submission and administration of compounds into a registration data store. It features all of ChemAxon’s cheminformatics capabilities to bring exceptional chemical resolution and automation to the process and professional features and interfaces for user and administrator handling.
