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EUGM 2008 ChemAxon Presentations
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Nora
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Link to postPosted: Fri May 23, 2008 9:36 pmPost subject: EUGM 2008 ChemAxon Presentations Reply with quote

EUGM 2008 ChemAxon Presentations

Archive of all ChemAxon Presentations of UGM 2008 Visegrad

This is the scientific presentation list ordered according to presentation sequence.

If visitors would like to forward questions to authors please send an email to nlapusnyik_at_chemaxon.com and I can forward to the author.

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http://www.chemaxon.com/UGM/08/program.html
Nora
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Link to postPosted: Sat May 24, 2008 9:09 pmPost subject: Future Strategy Reply with quote

Wednesday May 7th


Title: Company Overview: Future strategy, current developments, long term plans, mission & vision


Presenter: Alex Drijver

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 Filename: Future_strategy.pdf    Filesize: 511.56 KB    Downloaded: 1932 Time(s)
 Description:  Future strategy, current developments, long term plans, mission & vision
Nora
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Link to postPosted: Sat May 24, 2008 9:16 pmPost subject: Product Overview Reply with quote

Title: Product Overview


Presenter: David Spender

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 Filename: ChemAxon_product_overview.pdf    Filesize: 3.23 MB    Downloaded: 2352 Time(s)
 Description:  ChemAxon product overview
Nora
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Link to postPosted: Sat May 24, 2008 9:18 pmPost subject: Sketching and viewing with Marvin: features, tips and tricks Reply with quote

Title: Sketching and viewing with Marvin: features, tips and tricks

Presenter: Akos Papp

Abstract: This general presentation on Marvin will summarize the features, and detail the latest additions and improvements. The most important and newest features will be demonstrated, providing tips and tricks for their quicker and easier usage. The list of potential future features will also be presented, including the "traditional" voting session.

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Nora
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Link to postPosted: Sat May 24, 2008 9:19 pmPost subject: Chemical Database Management with JChem Base and Cartridge Reply with quote

Title: Chemical Database Management with JChem Base and Cartridge

Presenter: Szabolcs Csepregi

Abstract: JChem Base is a chemical database management toolkit to handle chemical structures and associated data (user-defined or predicted), stored in relational databases. JChem Cartridge provides similar functionality highly integrated into Oracle as well as an Oracle interface to other ChemAxon products.

The presentation will overview the main features, performance and interfaces of both products and will include a demo. Developments since the last UGM will be presented, with an open discussion of future plans.

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 Filename: Chemical_Database_Management_with_JChem_Base_and_Cartridge.pdf    Filesize: 4.88 MB    Downloaded: 3099 Time(s)
 Description:  Chemical Database Management with JChem Base and Cartridge
Nora
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Link to postPosted: Sat May 24, 2008 9:20 pmPost subject: Transformers of ChemAxon Reply with quote

Title: The Transformers of ChemAxon

Presenter: Gyorgy Pirok

Abstract:ChemAxon provides some tools for the transformation of molecules. The overview of these technologies will be followed by the demonstration of Standardizer and Reactor focusing on the new features, a new fragmentation tool and the upcoming Metabolizer application will be introduced for the first time.
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 Filename: Transformers_of ChemAxon.pdf    Filesize: 5.21 MB    Downloaded: 7101 Time(s)
 Description:  Transformers of ChemAxon
Nora
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Link to postPosted: Sat May 24, 2008 9:22 pmPost subject: Combinatorial Markush at ChemAxon: from drawing to analysis Reply with quote

Title: Combinatorial Markush at ChemAxon: from drawing to analysis

Presenter: Szabolcs Csepregi

Abstract: Markush structure handling at ChemAxon range of products will be presented, including drawing, visualization and generation of Markush structures, Markush enumeration techniques and searching. It will be shown how libraries more complex than 10^30 library size are handled, with the generic description including R-groups, atom and bond lists, link nodes and position variation. Further developments towards patent Markush structure handling will be also discussed.

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 Filename: Combinatorial_Markush_at_ChemAxon-from_drawing_to_analysis.pdf    Filesize: 3 MB    Downloaded: 1974 Time(s)
 Description:  Combinatorial Markush at ChemAxon: from drawing to analysis
Nora
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Link to postPosted: Sat May 24, 2008 9:23 pmPost subject: Pipelining ChemAxon Reply with quote

Title: Pipelining ChemAxon

Presenter: Szilard Dorant

Abstract: As a recent change in the ChemAxon - SciTegic collaboration, ChemAxon took over the responsibility for developing the ChemAxon Pipeline Pilot component collection with continued active support from our partner. A new, improved collection package has been released since then by ChemAxon in March 2008. The presentation covers the new components, improvements of existing components and plans for future development.

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 Filename: Pipelining_ChemAxon.pdf    Filesize: 2.83 MB    Downloaded: 1929 Time(s)
 Description:  Pipelining ChemAxon
Nora
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Link to postPosted: Sat May 24, 2008 9:23 pmPost subject: New product launch: JChem for Excel Reply with quote

Title: New product launch: JChem for Excel

Presenter: Tamás Pelcz

Abstract: JChem for Excel allows scientists to use JChem's features in the popular Office environment. It is implemented in .NET, so it also demonstrates the possibilities of integrating the Java based JChem, with .NET using open source technologies. The initial features are: Searching JChem databases, searching JChem Cartridge, R-group decomposition, calculation of molecular properties, SDF, XML import export.

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 Filename: JChem_for_Excel.pdf    Filesize: 822.17 KB    Downloaded: 2400 Time(s)
 Description:  JChem for Excel
Nora
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Link to postPosted: Sat May 24, 2008 9:25 pmPost subject: Calculator plugins - physico-chemical properties in a blink Reply with quote

Thursday May 8th


Title: Calculator plugins - physico-chemical properties in a blink


Presenter: Annamaria Jakab

Abstract: ChemAxon's Calculator Plugins help drug development planning, reaction optimization, combinatorial library handling by estimating the most important physico-chemical and descriptive properties of molecules. A wide variety of different plugins will be presented together with usage examples from the chemist's point of view. New features such as Markush enumeration and improvement of already existent plugins and future implementations will also be discussed.

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 Filename: Calculator_plugins_-_physico-chemical_properties_in_a_blink.pdf    Filesize: 4.13 MB    Downloaded: 2217 Time(s)
 Description:  Calculator plugins - physico-chemical properties in a blink
Nora
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Link to postPosted: Sat May 24, 2008 9:26 pmPost subject: Clustering made human Reply with quote

Title: Clustering made human


Presenter: Miklos Vargyas

Abstract: Clustering chemical structures alleviates the tedious task of browsing a large set of compounds by grouping individual structures into generic categories. ChemAxon's JKlustor product offers clustering solutions ranging from similarity based non-hierarchical method to a pure graph based technique. This latter exhibits some clear advantages over the more conventional approaches: clusters are more likely to meet human expectations and tangible explanation why certain compounds are grouped together is also produced. And even it is faster.

If you 'farm your classes' then it's time to 'MCS your library'!

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 Filename: Clustering_made_human.pdf    Filesize: 1.61 MB    Downloaded: 1907 Time(s)
 Description:  Clustering made human
Nora
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Link to postPosted: Sat May 24, 2008 9:28 pmPost subject: IUPAC Naming, there and back again Reply with quote

Title: IUPAC Naming, there and back again


Presenter: Daniel Bonniot

Abstract:

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 Filename: IUPAC_Naming_there_and_back_again.pdf    Filesize: 4.83 MB    Downloaded: 2036 Time(s)
 Description:  IUPAC Naming, there and back again
Nora
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Link to postPosted: Sat May 24, 2008 9:46 pmPost subject: Instant JChem - latest developments and future plans Reply with quote

Title: Instant JChem - latest developments and future plans


Presenter: Tim Dudgeon

Institution: ChemAxon

Abstract: Instant JChem is ChemAxon's desktop solution for chemistry. We will present the recent developments which have been primarily in improving the ability to deploy Instant JChem to a large community of users, and for those users to share information. We will also describe the functionality that is currently under development.

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 Filename: Instant_JChem-latest_developments_and_future_plans.pdf    Filesize: 2.73 MB    Downloaded: 1993 Time(s)
 Description:  Instant JChem - latest developments and future plans
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