Library

Meeting the ever-changing demands of synthetic chemistry - A chemical workbench for biopolymers

Apr 11, 2017 - Presentation
The in-silico tools and resources for a Design-Make-Test paradigm in small molecule chemistry have significantly advanced in the last half decade. We are nearing a point in time where a c…

Merck Virtual Library (MVL): Deployment, Application and Future Enhancement

Sep 14, 2016 - Presentation
An update of MVL will be given with some observations obtained from its one-year long cloud deployment in terms of performance, robustness, cost, and admin effort required. An overview of…

Challenges in Updating an Enterprise Environment: Progress Toward Updating the ChemAxon Tools at GlaxoSmithKline

Sep 15, 2016 - Presentation
ChemAxon has been a strategic partner with GSK for many years now and has allowed for GSK to envision a comprehensive Chemistry Desktop that works seamlessly from molecule design to all t…

Efficient Heuristics for Maximum Common Substructure Search

Apr 11, 2015 - Publication
Maximum common substructure search is a computationally hard optimization problem with diverse applications in the field of cheminformatics, including similarity search, lead optimization…

Fast similarity searching – making the virtual real

May 24, 2016 - Presentation
Similarity searching is a key component of many chemoinformatic processes including compound collection design, compound clustering and lead hopping. We have command-line tools for bespok…

Implementing an Integrated Compound Registration System in the Cloud

Sep 14, 2016 - Presentation
Compound Registration is a crucial component of small molecule research application platforms. The system needs to follow complex workflows in order to validate and standardize chemical s…

Compound Registration & Plexus Inventory

May 24, 2016 - Presentation
ChemAxon’s Compound Registration is a system built on a set of web services, aiding users to register molecular structures into a compound database. The registration process spots uniqu…

Biomolecules at ChemAxon

Sep 14, 2016 - Presentation
ChemAxon’s Biomolecule Toolkit – now extended with an editor, called BioEddie – is a webservice-based toolkit to bridge the gap between biology and chemistry for complex biomole…

ChemAxon's MadFast Search

May 24, 2016 - Presentation
MadFast is an ongoing development effort to provide useful tools for similarity based search, overlap analysis and clustering. I would like to give a short introduction on the current sta…

Compound Registration and Plexus Inventory

Sep 14, 2016 - Presentation
ChemAxon’s Compound Registration is a system built on a set of web services, aiding users to register molecular structures into a compound database. The registration process spots uniqu…

Small Molecules in Big Data: Proceed with Caution!

Sep 14, 2016 - Presentation
The Schürer research group at The University of Miami is one of three sites for the Big Data to Knowledge (BD2K) Data Coordination Integration Center (DCIC) of the Library of Integrated …

Biomolecule Toolkit

May 24, 2016 - Presentation
ChemAxon’s Biomolecule Toolkit is a webservice-based toolkit to bridge the gap between biology and chemistry for complex biomolecular entities. It provides unambiguous representation at…

Chemical search and database technologies

May 24, 2016 - Presentation
ChemAxon’s search and database technology includes our JChem Base tool and two cartridges: One running on Oracle, the other one on PostgreSQL. We usually refer to these products as …
debra

Migrating away from ISIS with ChemAxon's help

Sep 25, 2012 - Presentation
ISIS software has been used at Novartis for years to draw structures, manage personal substance and reaction collections, access shared databases. Last year NIBR IT decided to move to a m…
pelliccioli

Moving away from ISIS software with ChemAxon's help

May 22, 2012 - Presentation
ISIS software has been used for years within the Novartis Institutes for BioMedical Research (NIBR) to draw structures, manage personal substance and reaction collections, and access shar…
evotttt

Integrating JChem and Marvin with an ELN

May 19, 2010 - Presentation
We will describe how we (well Contur) are using Marvin & Reactor in their ELN and how we are using JChem Cartridge to link it to our compound sourcing database so searches can be don…
hinton

Benchmarking ChemAxon’s Name-to-Structure batch tool on patent text

May 17, 2011 - Presentation
SureChem is a provider of chemistry patent search products based on a database of 12 million chemical structures extracted from the full text of EP, US and WO patent documents as well as …
day02_snapshot_Zoltan_Simon_02

Drug Profile Matching - Drug Discovery by Polypharmacology-based Interaction Profiling

May 20, 2015 - Presentation
Most drugs exert their effects via multi-target interactions, as hypothesized by polypharmacology. Here we introduce Drug Profile Matching (DPM) which is able to relate complex drug-prote…
Product: JChem Base
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